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More details about sepsis.rdata

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prise6 2015-06-15 00:20:25 +02:00
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1
.Rbuildignore
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^.*\.Rproj$
^\.Rproj\.user$
^data-raw$

4
R/data.R
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#' \href{http://biopharmnet.com/wiki/Software_for_subgroup_identification_and_analysis}{SIDES
#' method}.
#'
#' \code{Sepsis} contains simulated data on 454 subjects with a binary outcome
#' \code{Sepsis} contains simulated data on 470 subjects with a binary outcome
#' survival, that stores survival status for patient after 28 days of treatment,
#' value of 1 for subjects who died after 28 days and 0 otherwise. There are 11
#' covariates, listed below, all of which are numerical variables.
@ -16,7 +16,7 @@
#'
#' True subgroup is \emph{PRAPACHE <= 26 & AGE <= 49.80}
#'
#' @format 454 patients and 13 variables.
#' @format 470 patients and 13 variables.
#' \describe{
#' \item{survival}{binary outcome}
#' \item{THERAPY}{1 for active treatment, 0 for control treatment}

42
data-raw/sepsis.R Normal file
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# Create sepsis data ------------------------------------------------------
# Load some libraries
library(VirtualTwins)
library(randomForest)
# Sepsis is a csv file available in SIDES example to this address:
# http://biopharmnet.com/wiki/Software_for_subgroup_identification_and_analysis
# type ?sepsis to see details
# I downloaded zip file and extract the sepsis.csv in data-raw folder.
sepsis.csv <- read.csv(file = "data-raw/sepsis.csv", na.strings = ".")
# Check data
str(sepsis.csv)
# Count NA's
sum(is.na(sepsis.csv))
# No NA's in outcome
sum(is.na(sepsis.csv$survival))
# For futures computation i need to impute missing values
# I use random forest imputation with randomForest package with simple parameters
# I need to make survival field as factor
sepsis.csv$survival <- factor(sepsis.csv$survival, levels = 0:1)
sepsis.imp <- with(sepsis.csv, rfImpute(y = survival, x = sepsis.csv[, -1], iter = 5, ntree = 500))
str(sepsis.imp)
# Change THERAPY levels in 0/1 and type will be numeric
sepsis.imp$THERAPY <- with(sepsis.csv, ifelse(THERAPY == "control", 0, 1))
# Change survival into numeric values
sepsis.imp$survival <- as.numeric(as.character(sepsis.imp$survival))
# Check data
sepsis <- formatRCTDataset(sepsis.imp, "survival", "THERAPY", T)
# Save file into data folder
save(sepsis, file = "data/sepsis.rdata")
# End.

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data-raw/sepsis.csv Normal file
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survival,THERAPY,PRAPACHE,AGE,BLGCS,ORGANNUM,BLIL6,BLLPLAT,BLLBILI,BLLCREAT,TIMFIRST,BLADL,blSOFA
0,active,19,42.921,15,1,301.8,191,.,1,17.17,0,5
1,active,48,68.818,11,2,118.9,.,0.4,1.1,17.17,5,10
0,active,20,68.818,15,2,92.8,123,.,1,10,1,7.5
0,active,19,33.174,14,2,1232,244,.,1.2,17.17,0,6.25
0,active,48,46.532,3,4,2568,45,.,3,10,0,12
0,control,21,56.098,14,1,162.65,137,0.5,.,10,0,8.75
1,control,19,68.818,15,2,2568,45,.,1,19.33,12,8.75
0,active,19,46.532,15,3,4952,92,.,1,27.08,0,10
0,active,22,56.098,15,3,118.9,.,2.5,5,24.5,0,12
1,active,19,56.098,10,3,2568,109,4.8,1.8,27.08,.,12
0,control,24,59.871,15,1,301.8,650,.,1.4,21.73,0,6.25
1,active,48,46.532,11,4,296550,45,2.5,2,34.83,.,17
0,active,19,81.13,12,2,162.65,650,.,1.5,30.67,3,3
1,active,29,93.336,14,2,118.9,.,0.6,1.2,30.67,6,7.5
0,control,33,65.891,14,4,12998,284,.,3,30.67,0,13
0,control,19,81.13,15,2,212.3,284,.,1.5,30.67,9,12
0,control,19,76.068,15,4,92.8,650,.,1,44.73,6,5
0,control,26,38.113,6,3,301.8,217,.,1,39.83,0,8.75
0,active,19,81.13,15,1,92.8,153,.,2.2,3775.9,0,6.25
0,active,25,81.13,14,3,2568,109,.,1.8,50.67,11,13
1,active,37,68.818,10,3,519.4,359,.,20,59.17,12,17
0,active,25,46.532,6,1,92.8,153,.,1,67.5,0,5
1,active,19,56.098,14,2,162.65,359,.,1.2,50.67,4,10
1,control,19,63.471,14,1,60.3,172,.,1,67.5,0,5
0,active,19,38.113,15,3,296550,284,1.6,2.2,17.17,.,9
1,active,19,42.921,14,1,519.4,244,0.4,1,19.33,.,3
1,active,23,93.336,11,1,301.8,650,0.6,1.1,17.17,.,5
0,active,37,49.823,9,2,.,217,20.4,1.6,10,0,13
0,active,25,53.656,15,1,.,137,20.4,1,13.78,0,6
1,control,48,81.13,5,4,.,359,0.7,20,17.17,8,11
0,control,28,42.921,6,3,296550,92,1.4,3,17.17,.,10
0,control,19,49.823,15,2,4952,123,0.4,1,13.78,.,7
1,control,48,76.068,3,4,.,284,20.4,2.4,10,0,12
0,active,20,46.532,13,4,12998,78,1.2,3,30.67,.,12
1,active,33,65.891,7,4,723,109,1.6,3.8,24.5,.,9
1,active,29,76.068,6,4,.,191,0.4,1.8,21.73,0,8
0,active,26,42.921,15,2,.,153,3.4,1.4,21.73,0,10
1,active,48,53.656,3,4,.,78,3.4,20,21.73,0,17
1,active,48,49.823,4,5,296550,45,3.4,3.8,27.08,.,17
1,active,27,81.13,15,4,.,191,1.9,1,27.08,0,7
0,active,48,49.823,3,4,519.4,45,4.8,5,27.08,.,13
0,control,27,73.138,15,2,1232,650,2.5,2.2,19.33,.,11
0,control,22,38.113,15,1,.,244,0.5,1,21.73,0,5
1,control,33,93.336,8,3,723,123,0.9,3,21.73,.,11
0,active,31,76.068,14,3,92.8,78,0.4,1.4,44.73,.,10
0,active,28,33.174,3,2,1232,92,1,1.1,44.73,.,5
1,active,29,56.098,11,3,296550,123,0.9,20,30.67,.,11
0,active,20,33.174,11,1,.,153,2.5,1,30.67,0,8
0,active,27,33.174,11,1,.,359,0.9,1,34.83,0,3
1,control,19,59.871,15,3,212.3,62,1,20,39.83,.,10
0,active,19,49.823,15,1,118.9,650,0.5,1,67.5,.,4
1,active,27,65.891,7,2,118.9,153,0.9,2.2,59.17,.,6
0,active,19,73.138,15,3,37.1,109,0.5,2.4,3775.9,.,5
0,active,25,38.113,8,3,301.8,123,0.6,5,59.17,.,11
0,active,26,59.871,15,2,.,172,1.2,1.5,59.17,0,9
1,active,48,68.818,3,5,12998,78,4.8,20,59.17,.,17
1,active,26,81.13,15,3,1232,137,0.5,1.4,50.67,.,9
0,active,20,68.818,15,2,.,153,0.9,3.8,3775.9,0,8
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0,active,19,53.656,11,2,.,172,1,1,50.67,0,7
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0,control,20,42.921,13,3,60.3,123,0.4,1.2,24.5,7,6.25
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1,active,19,53.656,15,3,406.6,45,20.4,1.5,39.83,0,17
1,active,19,76.068,14,1,60.3,284,20.4,1.4,34.83,4,5
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0,control,24,76.068,13,2,2568,359,0.4,1.6,34.83,2,6.25
1,control,27,76.068,15,4,162.65,62,0.9,5,34.83,0,8.75
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0,active,26,81.13,8,2,519.4,109,0.5,3.8,67.5,9,5
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1,active,23,49.823,14,1,60.3,217,1.4,1,10,4,4
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1,active,48,53.656,12,3,212.3,92,0.6,20,13.78,12,13
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0,active,26,68.818,10,3,4952,123,3.4,20,59.17,9,12
0,active,24,42.921,3,3,60.3,92,0.5,2.2,59.17,0,9
1,active,48,76.068,3,4,519.4,92,1.4,3.8,67.5,0,17
0,active,19,63.471,13,3,37.1,284,0.7,1.3,50.67,4,7
1,active,21,63.471,11,2,92.8,92,1.6,1,67.5,0,6
0,active,19,73.138,12,2,118.9,78,1,1,50.67,0,7
0,active,19,76.068,14,1,118.9,123,1.2,1,3775.9,0,4
1,control,19,59.871,11,1,301.8,650,0.4,1,67.5,1,5
1,control,19,38.113,15,2,301.8,172,0.8,1,50.67,6,3
0,control,19,38.113,15,2,37.1,153,0.4,1.1,3775.9,0,7
0,control,19,38.113,10,2,60.3,284,0.7,1,59.17,0,8
0,control,26,46.532,14,2,406.6,244,3.4,20,50.67,0,9
1,control,27,46.532,12,2,118.9,78,1.6,1.8,59.17,0,10
0,control,20,33.174,12,2,296550,153,3.4,1,50.67,8,8
0,control,29,93.336,11,2,162.65,217,0.9,1,3775.9,0,5
0,control,27,73.138,8,1,1232,172,0.5,2,67.5,12,7
1,control,19,81.13,12,1,37.1,137,0.4,1.3,50.67,12,7
1,control,19,42.921,14,2,92.8,217,0.5,1,3775.9,0,5
0,control,19,56.098,7,2,519.4,153,0.4,1.2,3775.9,0,5
0,control,20,33.174,15,4,2568,137,0.5,1.8,3775.9,0,7
0,control,21,76.068,11,3,212.3,62,1.4,1.4,59.17,8,8
0,control,27,38.113,14,2,92.8,191,20.4,20,3775.9,0,17
0,control,25,49.823,12,5,60.3,78,4.8,5,67.5,0,17
0,control,28,46.532,9,2,406.6,123,1.9,1,3775.9,0,9
0,control,19,59.871,7,2,92.8,78,0.7,1,3775.9,0,3
0,control,25,65.891,15,4,2568,62,1.2,3.8,50.67,0,9
0,control,19,33.174,15,1,1232,62,0.8,1.2,67.5,0,3
0,control,19,59.871,15,3,118.9,92,20.4,20,67.5,0,12
0,control,19,49.823,15,4,2568,45,3.4,5,3775.9,8,17
0,control,33,56.098,3,3,2568,284,2.5,1,59.17,0,9
0,control,26,46.532,4,2,212.3,45,2.5,1.2,67.5,0,10
0,control,37,93.336,5,2,212.3,217,0.4,3.8,3775.9,8,6
0,control,22,68.818,6,3,723,78,4.8,1,3775.9,0,11
0,control,27,53.656,15,2,301.8,359,0.7,1.2,67.5,0,9
0,control,19,65.891,15,3,37.1,359,0.4,3.8,67.5,0,8
1,control,25,33.174,3,1,212.3,137,0.4,1,3775.9,0,7
0,control,19,59.871,14,1,37.1,650,4.8,1,3775.9,11,5
0,control,19,38.113,10,1,37.1,191,0.5,1,59.17,0,3
0,control,37,73.138,3,2,92.8,153,2.5,1,50.67,0,9
1 survival THERAPY PRAPACHE AGE BLGCS ORGANNUM BLIL6 BLLPLAT BLLBILI BLLCREAT TIMFIRST BLADL blSOFA
2 0 active 19 42.921 15 1 301.8 191 . 1 17.17 0 5
3 1 active 48 68.818 11 2 118.9 . 0.4 1.1 17.17 5 10
4 0 active 20 68.818 15 2 92.8 123 . 1 10 1 7.5
5 0 active 19 33.174 14 2 1232 244 . 1.2 17.17 0 6.25
6 0 active 48 46.532 3 4 2568 45 . 3 10 0 12
7 0 control 21 56.098 14 1 162.65 137 0.5 . 10 0 8.75
8 1 control 19 68.818 15 2 2568 45 . 1 19.33 12 8.75
9 0 active 19 46.532 15 3 4952 92 . 1 27.08 0 10
10 0 active 22 56.098 15 3 118.9 . 2.5 5 24.5 0 12
11 1 active 19 56.098 10 3 2568 109 4.8 1.8 27.08 . 12
12 0 control 24 59.871 15 1 301.8 650 . 1.4 21.73 0 6.25
13 1 active 48 46.532 11 4 296550 45 2.5 2 34.83 . 17
14 0 active 19 81.13 12 2 162.65 650 . 1.5 30.67 3 3
15 1 active 29 93.336 14 2 118.9 . 0.6 1.2 30.67 6 7.5
16 0 control 33 65.891 14 4 12998 284 . 3 30.67 0 13
17 0 control 19 81.13 15 2 212.3 284 . 1.5 30.67 9 12
18 0 control 19 76.068 15 4 92.8 650 . 1 44.73 6 5
19 0 control 26 38.113 6 3 301.8 217 . 1 39.83 0 8.75
20 0 active 19 81.13 15 1 92.8 153 . 2.2 3775.9 0 6.25
21 0 active 25 81.13 14 3 2568 109 . 1.8 50.67 11 13
22 1 active 37 68.818 10 3 519.4 359 . 20 59.17 12 17
23 0 active 25 46.532 6 1 92.8 153 . 1 67.5 0 5
24 1 active 19 56.098 14 2 162.65 359 . 1.2 50.67 4 10
25 1 control 19 63.471 14 1 60.3 172 . 1 67.5 0 5
26 0 active 19 38.113 15 3 296550 284 1.6 2.2 17.17 . 9
27 1 active 19 42.921 14 1 519.4 244 0.4 1 19.33 . 3
28 1 active 23 93.336 11 1 301.8 650 0.6 1.1 17.17 . 5
29 0 active 37 49.823 9 2 . 217 20.4 1.6 10 0 13
30 0 active 25 53.656 15 1 . 137 20.4 1 13.78 0 6
31 1 control 48 81.13 5 4 . 359 0.7 20 17.17 8 11
32 0 control 28 42.921 6 3 296550 92 1.4 3 17.17 . 10
33 0 control 19 49.823 15 2 4952 123 0.4 1 13.78 . 7
34 1 control 48 76.068 3 4 . 284 20.4 2.4 10 0 12
35 0 active 20 46.532 13 4 12998 78 1.2 3 30.67 . 12
36 1 active 33 65.891 7 4 723 109 1.6 3.8 24.5 . 9
37 1 active 29 76.068 6 4 . 191 0.4 1.8 21.73 0 8
38 0 active 26 42.921 15 2 . 153 3.4 1.4 21.73 0 10
39 1 active 48 53.656 3 4 . 78 3.4 20 21.73 0 17
40 1 active 48 49.823 4 5 296550 45 3.4 3.8 27.08 . 17
41 1 active 27 81.13 15 4 . 191 1.9 1 27.08 0 7
42 0 active 48 49.823 3 4 519.4 45 4.8 5 27.08 . 13
43 0 control 27 73.138 15 2 1232 650 2.5 2.2 19.33 . 11
44 0 control 22 38.113 15 1 . 244 0.5 1 21.73 0 5
45 1 control 33 93.336 8 3 723 123 0.9 3 21.73 . 11
46 0 active 31 76.068 14 3 92.8 78 0.4 1.4 44.73 . 10
47 0 active 28 33.174 3 2 1232 92 1 1.1 44.73 . 5
48 1 active 29 56.098 11 3 296550 123 0.9 20 30.67 . 11
49 0 active 20 33.174 11 1 . 153 2.5 1 30.67 0 8
50 0 active 27 33.174 11 1 . 359 0.9 1 34.83 0 3
51 1 control 19 59.871 15 3 212.3 62 1 20 39.83 . 10
52 0 active 19 49.823 15 1 118.9 650 0.5 1 67.5 . 4
53 1 active 27 65.891 7 2 118.9 153 0.9 2.2 59.17 . 6
54 0 active 19 73.138 15 3 37.1 109 0.5 2.4 3775.9 . 5
55 0 active 25 38.113 8 3 301.8 123 0.6 5 59.17 . 11
56 0 active 26 59.871 15 2 . 172 1.2 1.5 59.17 0 9
57 1 active 48 68.818 3 5 12998 78 4.8 20 59.17 . 17
58 1 active 26 81.13 15 3 1232 137 0.5 1.4 50.67 . 9
59 0 active 20 68.818 15 2 . 153 0.9 3.8 3775.9 0 8
60 0 active 19 33.174 10 1 . 172 0.9 1 67.5 0 4
61 0 active 19 53.656 11 2 . 172 1 1 50.67 0 7
62 0 control 31 63.471 6 4 . 62 0.9 1.4 59.17 0 9
63 0 control 19 56.098 15 3 60.3 78 1.9 1.6 24.5 0 10
64 0 active 20 42.921 10 3 60.3 92 20.4 1.2 17.17 0 12
65 0 active 25 49.823 15 2 60.3 92 0.8 20 10 0 8.75
66 1 active 29 38.113 7 3 4952 359 1.9 1.4 19.33 12 8.75
67 0 active 21 49.823 15 4 406.6 78 0.6 2 13.78 3 7.5
68 1 active 21 93.336 15 4 12998 123 1.2 2 19.33 2 12
69 1 active 24 81.13 11 1 296550 359 1.2 1.6 13.78 0 4
70 0 active 19 46.532 13 1 212.3 92 1.9 1.1 27.08 12 6.25
71 0 active 19 49.823 13 1 212.3 45 0.6 1.5 27.08 0 5
72 1 active 19 42.921 15 1 301.8 123 1 1 21.73 0 5
73 1 active 29 53.656 10 2 301.8 78 4.8 2 19.33 0 10
74 0 active 19 33.174 15 4 2568 45 0.7 2 30.67 0 10
75 0 active 19 38.113 8 1 301.8 359 1.9 1 27.08 0 5
76 1 active 24 59.871 14 3 723 109 2.5 2 27.08 0 17
77 0 active 19 65.891 15 3 212.3 109 2.5 2 21.73 0 12
78 0 active 21 42.921 15 3 12998 62 1.2 2 19.33 0 13
79 0 active 28 81.13 13 2 2568 244 1.9 1 21.73 0 10
80 0 active 19 49.823 15 4 12998 137 0.6 2 24.5 0 8.75
81 0 active 19 49.823 15 1 118.9 359 0.4 1.3 24.5 0 5
82 0 control 33 59.871 9 1 12998 359 1.2 3 27.08 12 6.25
83 0 control 20 42.921 13 3 60.3 123 0.4 1.2 24.5 7 6.25
84 1 active 37 53.656 7 4 37.1 78 0.4 5 44.73 0 10
85 0 active 19 81.13 15 2 406.6 217 0.4 1.1 30.67 0 4
86 0 active 21 33.174 12 5 1232 78 0.4 5 44.73 0 12
87 1 active 19 53.656 15 3 406.6 45 20.4 1.5 39.83 0 17
88 1 active 19 76.068 14 1 60.3 284 20.4 1.4 34.83 4 5
89 0 control 33 65.891 11 3 212.3 359 3.4 2 39.83 0 13
90 0 control 19 42.921 15 1 92.8 650 1.4 2.4 30.67 0 4
91 0 control 24 76.068 13 2 2568 359 0.4 1.6 34.83 2 6.25
92 1 control 27 76.068 15 4 162.65 62 0.9 5 34.83 0 8.75
93 0 active 21 42.921 7 2 212.3 45 20.4 3.8 67.5 0 13
94 0 active 26 81.13 8 2 519.4 109 0.5 3.8 67.5 9 5
95 1 active 24 81.13 14 2 60.3 109 0.5 3.8 50.67 9 8.75
96 0 active 21 46.532 15 4 406.6 62 4.8 5 50.67 0 17
97 0 active 19 46.532 15 5 12998 62 3.4 2 59.17 0 17
98 0 active 19 63.471 15 1 92.8 359 0.4 1.4 50.67 0 3
99 1 active 31 59.871 9 3 37.1 123 20.4 2 67.5 12 10
100 0 active 19 42.921 15 4 118.9 78 1.4 2 59.17 0 12
101 0 active 19 46.532 14 1 60.3 217 1.9 1 59.17 0 6.25
102 1 active 19 93.336 15 2 2568 45 0.7 1.2 59.17 6 5
103 1 active 19 73.138 10 1 406.6 284 0.5 1 59.17 0 3
104 0 control 19 76.068 9 4 519.4 45 0.5 1.1 50.67 0 8.75
105 0 control 27 63.471 12 1 519.4 45 3.4 2.2 50.67 0 13
106 1 control 19 53.656 14 1 37.1 284 0.7 20 59.17 8 8.75
107 0 active 19 49.823 15 3 12998 359 1.9 2.2 17.17 7 9
108 1 active 19 73.138 14 3 4952 92 2.5 1.5 10 0 9
109 1 active 23 49.823 14 1 60.3 217 1.4 1 10 4 4
110 1 active 24 59.871 13 2 118.9 109 1.2 1.6 17.17 0 7
111 1 active 31 73.138 14 2 60.3 650 0.4 1.3 10 5 7
112 1 active 27 76.068 15 3 296550 650 0.4 1 10 3 8
113 1 active 28 68.818 14 3 2568 244 20.4 1 13.78 12 12
114 0 active 21 42.921 15 2 723 137 4.8 1.1 13.78 7 5
115 0 active 19 49.823 15 3 296550 78 0.5 1 13.78 11 7
116 0 active 19 38.113 14 1 519.4 359 4.8 1.3 10 12 7
117 0 active 23 46.532 15 4 296550 109 0.7 1 13.78 0 6
118 1 active 19 81.13 15 2 162.65 191 1.2 3 19.33 5 7
119 0 active 26 93.336 14 2 406.6 123 0.8 3 19.33 11 9
120 1 active 37 81.13 15 1 92.8 650 0.4 2.2 10 0 5
121 0 active 25 68.818 13 1 296550 137 0.4 1.4 13.78 9 7
122 1 active 31 81.13 14 2 212.3 650 0.4 1.5 10 0 7
123 1 active 48 53.656 12 3 212.3 92 0.6 20 13.78 12 13
124 0 active 22 42.921 15 3 4952 78 4.8 2.2 13.78 0 8
125 1 active 28 63.471 11 2 37.1 284 0.8 1 17.17 12 8
126 0 active 22 59.871 15 4 296550 92 1.6 1 10 9 11
127 1 active 19 73.138 15 1 4952 172 0.4 1.3 10 1 3
128 0 active 19 63.471 15 1 2568 62 0.9 1.3 17.17 0 5
129 1 active 37 68.818 5 3 296550 191 1.4 1.3 17.17 12 10
130 1 active 33 65.891 14 2 1232 244 1 1.4 10 7 8
131 0 active 27 42.921 6 3 296550 78 1 1 17.17 0 10
132 0 active 19 59.871 15 2 1232 109 20.4 1.1 10 0 9
133 1 active 21 81.13 12 2 723 153 0.7 1.5 13.78 0 5
134 1 active 19 53.656 15 1 12998 191 1.6 1.2 13.78 0 7
135 0 active 26 42.921 15 3 296550 137 0.7 2.4 17.17 0 11
136 1 active 29 93.336 9 2 212.3 359 1.2 1.1 17.17 10 6
137 0 active 20 46.532 8 1 37.1 284 0.7 1 13.78 0 3
138 0 active 19 38.113 15 3 296550 172 0.6 2 10 0 7
139 1 active 33 73.138 13 3 12998 123 1.9 2.4 10 5 12
140 1 active 48 81.13 10 3 12998 244 2.5 2.2 19.33 6 11
141 0 active 24 63.471 15 2 60.3 650 0.8 1.1 10 2 3
142 1 active 37 81.13 4 3 296550 109 0.8 3 13.78 0 10
143 1 active 33 38.113 14 1 60.3 217 0.7 20 10 0 6
144 1 active 19 46.532 15 1 37.1 172 0.6 1 10 0 3
145 0 active 26 65.891 12 2 37.1 217 3.4 2.2 17.17 0 11
146 0 active 19 33.174 11 3 212.3 45 20.4 3 13.78 12 11
147 0 active 21 81.13 15 2 12998 191 1 1.2 17.17 1 7
148 1 active 28 65.891 6 4 2568 217 1.6 3.8 10 0 10
149 0 active 19 56.098 15 3 92.8 191 0.5 1.2 17.17 0 8
150 0 active 20 33.174 15 3 12998 191 4.8 1.5 17.17 9 10
151 1 active 28 53.656 14 1 1232 650 0.4 1 10 8 3
152 0 active 19 73.138 15 1 1232 191 1.9 2.2 10 0 7
153 0 active 19 53.656 15 1 60.3 172 1.6 1 10 7 5
154 0 active 19 68.818 15 2 12998 191 0.4 1 13.78 0 5
155 0 active 19 93.336 15 1 519.4 137 20.4 1.6 10 0 7
156 1 active 37 63.471 15 1 519.4 359 0.5 20 19.33 0 10
157 1 active 22 65.891 14 2 162.65 650 3.4 1.8 13.78 0 10
158 1 active 37 63.471 4 1 37.1 650 0.5 1 13.78 12 6
159 1 active 37 73.138 9 3 4952 217 0.8 2.2 17.17 2 10
160 0 active 33 33.174 3 1 60.3 123 0.9 1 10 0 6
161 0 active 23 81.13 12 4 1232 123 0.9 1 17.17 9 8
162 1 active 22 49.823 7 1 723 244 2.5 1.2 13.78 0 7
163 0 active 20 46.532 15 2 1232 244 0.9 1.2 13.78 0 9
164 0 active 48 76.068 10 3 406.6 191 3.4 3 13.78 0 7
165 1 active 31 76.068 6 2 212.3 62 20.4 3 17.17 12 11
166 1 active 29 76.068 8 3 406.6 92 1 1.4 13.78 0 9
167 0 active 19 59.871 15 1 92.8 244 1 1 13.78 0 4
168 0 active 27 38.113 15 1 12998 153 0.9 2.4 13.78 0 10
169 1 control 20 53.656 14 1 37.1 172 0.6 2.2 13.78 0 7
170 1 control 21 33.174 15 2 162.65 62 1.9 1 13.78 0 6
171 1 control 23 49.823 11 2 2568 153 0.7 1 10 0 7
172 1 control 19 49.823 15 2 723 45 3.4 1 10 0 10
173 0 control 19 49.823 15 2 12998 244 0.8 1.4 13.78 0 5
174 0 control 20 93.336 15 2 92.8 284 0.6 1 17.17 2 6
175 1 control 33 59.871 9 2 723 284 0.4 1 17.17 0 7
176 0 control 19 73.138 15 1 1232 217 0.9 1.3 17.17 0 7
177 1 control 27 59.871 15 2 4952 109 1 3.8 19.33 0 10
178 0 control 48 65.891 12 3 296550 217 4.8 1.6 13.78 5 11
179 0 control 21 56.098 14 1 162.65 109 3.4 2.4 10 0 9
180 0 control 29 53.656 13 4 162.65 359 0.6 3.8 13.78 0 10
181 0 control 37 93.336 11 3 296550 217 0.6 3 10 0 10
182 0 control 28 68.818 14 3 12998 284 0.4 1 17.17 1 8
183 0 control 28 73.138 15 2 118.9 123 20.4 1 19.33 0 9
184 1 control 19 93.336 14 2 4952 217 1 1 10 0 4
185 0 control 23 38.113 15 3 92.8 123 0.6 3.8 17.17 0 6
186 1 control 19 73.138 15 2 212.3 244 0.4 1.4 10 10 5
187 1 control 48 42.921 13 4 296550 284 0.6 3.8 17.17 0 9
188 0 control 19 49.823 11 4 406.6 217 1.2 1 19.33 0 4
189 0 control 23 42.921 15 4 2568 45 1.9 1.1 10 0 10
190 0 control 29 68.818 7 3 296550 123 0.7 1 13.78 7 9
191 0 control 19 46.532 15 1 162.65 650 0.6 1.1 10 0 3
192 1 control 21 63.471 15 1 519.4 284 1.4 1.6 17.17 0 5
193 0 control 21 68.818 15 2 723 217 1.9 3 17.17 0 10
194 0 control 20 38.113 13 2 12998 191 0.4 1.8 10 0 8
195 1 active 33 63.471 11 3 4952 109 2.5 1.8 19.33 1 11
196 1 active 33 76.068 13 4 37.1 78 0.5 3 21.73 8 10
197 1 active 29 73.138 10 2 301.8 191 1.2 1 27.08 0 8
198 1 active 24 68.818 14 3 2568 123 4.8 1 19.33 0 8
199 1 active 23 81.13 14 3 4952 172 0.9 3.8 27.08 0 11
200 0 active 22 65.891 14 2 92.8 137 0.4 1.8 21.73 3 9
201 0 active 22 33.174 15 4 296550 153 3.4 3 24.5 0 12
202 0 active 22 53.656 15 3 2568 45 1.4 2.4 24.5 0 13
203 1 active 28 81.13 15 1 212.3 123 0.4 20 21.73 0 7
204 0 active 21 73.138 15 3 4952 137 1.9 2.2 21.73 0 6
205 0 active 28 59.871 15 4 37.1 191 1.4 1 24.5 1 8
206 0 active 19 76.068 12 3 162.65 62 1.6 1.8 24.5 1 6
207 1 active 48 81.13 9 3 162.65 153 0.4 2.4 27.08 0 10
208 1 active 25 76.068 10 2 212.3 217 0.4 1.3 24.5 10 8
209 0 active 20 38.113 12 1 723 109 1.9 1.2 19.33 0 7
210 1 active 19 59.871 12 1 1232 109 0.5 1.2 27.08 0 6
211 0 active 31 46.532 3 4 406.6 359 0.7 1.1 19.33 7 7
212 1 active 33 73.138 12 1 723 191 20.4 2.4 19.33 0 8
213 1 active 31 93.336 15 4 301.8 92 0.5 3 21.73 9 7
214 1 active 37 68.818 8 3 12998 78 3.4 1.5 27.08 0 11
215 1 active 48 76.068 3 2 296550 284 0.9 3 24.5 11 9
216 0 active 22 76.068 15 1 37.1 244 0.4 1.8 19.33 0 6
217 0 active 20 56.098 14 5 212.3 92 1.6 5 21.73 0 10
218 1 active 37 73.138 9 3 1232 244 1.4 1.8 24.5 8 10
219 0 active 24 59.871 14 2 519.4 137 0.7 20 24.5 0 11
220 0 active 22 42.921 15 2 1232 244 0.8 3 21.73 0 10
221 1 active 19 53.656 10 1 92.8 217 1.2 1.3 21.73 0 3
222 0 active 26 65.891 9 2 37.1 137 1.6 1 24.5 0 7
223 0 active 33 49.823 11 2 212.3 123 0.7 20 24.5 5 12
224 1 active 37 53.656 3 2 118.9 172 0.7 20 21.73 1 11
225 1 active 19 81.13 15 1 519.4 244 0.4 1.4 27.08 0 6
226 1 active 27 68.818 15 2 60.3 650 0.8 1.4 21.73 0 6
227 0 active 26 56.098 11 5 296550 78 3.4 1.4 27.08 9 12
228 1 active 29 63.471 11 4 4952 123 20.4 5 27.08 6 17
229 0 active 25 63.471 15 3 2568 284 0.4 3 30.67 0 9
230 0 active 21 93.336 15 2 406.6 109 1.4 1.8 19.33 0 8
231 0 active 25 56.098 11 2 212.3 217 3.4 2 21.73 0 9
232 0 active 25 59.871 9 2 1232 191 1.4 1 19.33 0 8
233 0 active 19 73.138 14 2 723 78 0.6 1 24.5 0 7
234 0 active 20 42.921 11 1 519.4 244 0.8 1.2 24.5 0 5
235 0 active 19 76.068 15 4 519.4 62 1.6 1 19.33 0 8
236 0 active 21 81.13 13 1 60.3 191 0.5 2.2 24.5 3 5
237 0 active 31 49.823 15 2 296550 123 3.4 3 21.73 0 13
238 0 active 23 33.174 15 5 723 45 4.8 2.4 27.08 0 17
239 0 active 48 63.471 3 3 723 78 1.2 3 24.5 12 12
240 0 active 33 42.921 3 2 37.1 62 0.6 5 21.73 0 10
241 1 active 31 38.113 15 4 296550 109 0.7 1.3 21.73 0 10
242 0 active 25 76.068 11 2 2568 284 0.4 1.4 24.5 12 8
243 0 active 19 42.921 15 2 12998 137 2.5 1 27.08 0 11
244 0 active 19 33.174 14 3 1232 359 0.4 1.8 24.5 0 6
245 0 active 25 42.921 7 1 301.8 123 1.6 1.6 24.5 0 7
246 0 active 29 49.823 10 3 406.6 153 2.5 1.8 21.73 0 12
247 0 active 21 53.656 15 2 60.3 92 1.6 2.4 27.08 0 7
248 1 control 37 46.532 8 3 12998 45 20.4 1.8 19.33 11 17
249 1 control 26 49.823 15 2 301.8 217 3.4 1 19.33 7 9
250 0 control 31 73.138 5 4 162.65 62 0.6 1.8 21.73 0 9
251 0 control 22 63.471 15 4 12998 62 1 1.1 27.08 4 7
252 0 control 27 63.471 14 2 2568 172 1.4 5 19.33 0 11
253 1 control 23 63.471 9 1 12998 191 2.5 3.8 27.08 0 9
254 0 control 22 33.174 13 2 723 217 0.4 20 24.5 0 8
255 0 control 21 63.471 14 2 301.8 359 20.4 1.1 27.08 0 9
256 1 control 22 73.138 11 3 1232 284 0.5 1.1 24.5 7 5
257 0 control 48 76.068 7 3 723 109 1.4 3.8 24.5 8 12
258 1 control 28 42.921 7 2 92.8 217 0.5 1 21.73 0 6
259 0 control 37 65.891 15 2 296550 172 4.8 2.2 19.33 1 9
260 1 control 20 56.098 5 2 162.65 109 0.8 1.4 27.08 0 7
261 1 control 31 73.138 15 4 118.9 153 1.2 3.8 30.67 8 12
262 0 control 25 33.174 15 2 37.1 78 1 1.5 19.33 1 11
263 1 control 23 33.174 15 1 118.9 244 0.4 1 24.5 0 4
264 0 control 29 33.174 3 3 92.8 359 4.8 2.4 27.08 12 10
265 0 control 25 53.656 12 3 118.9 92 1.6 1 19.33 0 9
266 1 control 20 73.138 12 2 92.8 650 0.9 1 19.33 0 4
267 0 control 19 63.471 12 2 301.8 172 20.4 1.5 27.08 0 11
268 0 control 19 65.891 12 1 162.65 217 2.5 1 27.08 10 5
269 1 control 31 56.098 13 4 4952 109 0.9 5 27.08 0 12
270 1 control 28 63.471 11 2 519.4 650 0.4 1 24.5 0 7
271 0 control 26 68.818 12 2 37.1 284 0.6 1.5 21.73 1 8
272 1 control 26 65.891 14 2 1232 244 0.9 5 24.5 9 8
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data/sepsis.rdata
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